Dear Ben,
Worth noting: i will use the output file to model something else.
D. B.
On Thu, 15 Aug 2019 at 17:25, Danilo Boskovic daniloboskovic0095@gmail.com wrote:
> Dear Ben, > > Is it possible? I know that i can model residues according to the > tutorial: select the residues and use as a template to model the full > structure. So i did it and the structure was severely impacted (RMSD 0.25). > Loopmodel de-novo can do it without problems although i wish i could > utilize my other structure file that is basically just a different > conformation due to a ligand, but the deviation at the positions where the > residues are missing are minuscule. > > If not then i have two choices: de-novo and the automodel with a change in > conformation of 0.25 RMSD. Which one would you choose? > > Sincerely, > > D. Boskovic >