22 Nov
2001
22 Nov
'01
2:44 p.m.
Dear modeller users,
After i am getting the initial model using modeller if any bad regions are there(loop regions) i am using the following module for refinement.
INCLUDE SET SEQUENCE = 'topmodel' SET MODEL = 'topmodel.pdb' SET STARTING_MODEL = 1 SET ENDING_MODEL = 2 CALL ROUTINE = 'loop'
SUBROUTINE ROUTINE = 'select_atoms' PICK_ATOMS SELECTION_SEGMENT = '0:' '3:', SELECTION_STATUS ='initialize' RETURN END_SUBROUTINE
Actually i want to know whether the following module does the refinement of the loop or the loop building with some other loop.Please tell what is the exact use of this module.Expecting for your reply.
Yours friendly, Senthil kumar.R