28 Aug
2002
28 Aug
'02
10:01 a.m.
Dear all,
It is possible, that you have received this message already. I would like to optimize a protein model using molecular dynamics approach,
but I have a problem with choosing of parameters for OPTIMIZE command
(MD_TIME_STEP, MAX_ITERATIONS, TEMPERATURE etc).
Does anybody know a suitable MD script for model optimization in Modeler 6.2?
Thank you very much for your kind help!
With best regards,
Alex Bazilevsky
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Alex Bazilevsky PhD student Protein Engineering Departmant Institute of Molecular Biology & Genetics 150 Acad. Zabolotnogo Street Kiev, 03143, Ukraine Tel.: 38 044 266-5589, Fax: 38 044 266-0759
E-mail: alextk@univ.kiev.ua