MALIGN3D

I'm trying to align the structures that modeller produces by using the following top script:

SET ATOM_FILES = 'hp2y1.B99990001' 'hp2y1.B99990002' 'hp2y1.B99990003' ;

'hp2y1.B99990004' 'hp2y1.B99990005' SET WRITE_FIT = on SET MAXRES = 2000 MALIGN3D

Modeller gives an error: malign3_327W> Only one structure; nothing done.

How can I tell modeller to align the structures even if they are the same? Thanks, Dan

-- Dan Thomas Major (at Dr. B. Fischer's lab) Bar-Ilan University Ramat-Gan, Israel