[modeller_usage] importing alignment into modeller.

Is there any way to import alignment created without using modeller. Do I have to manual make a new ali file in the pir format for modeller. Could you please calarify the how the alignment was imported into modeller in the difficult example from http://bioinf.cs.ucl.ac.uk/psipred/

Knut J _________________________________________________________________ Hotmail: Powerful Free email with security by Microsoft. https://signup.live.com/signup.aspx?id=60969