Re: [modeller_usage] structure not read in

On Sun, Jan 11, 2004 at 10:20:34AM +0530, Jaimin Shah wrote: > I am a novice for this program. I would really appreciate it if you can > expedite matters for me by solving my hurdles. > I am getting the message: > check_a_343_> >> BEGINNING OF COMMAND > check_a_337E> Structure not read in: 1 1

Perhaps you have a sequence mismatch between your structure and your alignment? It's hard to tell from the output you've posted here. What errors or warnings do you get prior to that? I suggest you also put SET OUTPUT_CONTROL = 1 1 1 1 1 at the start of your TOP file, if you haven't already, to increase the amount of Modeller output.

Ben Webb, Modeller Caretaker