(- suse linux 8.1
 - modeller6v2
 - file pdb is pdb1f4a.ent
)


with file modelo1.top the process to run correctly
 

INCLUDE

SET OUTPUT_CONTROL = 1 1 1 1 1
SET ALNFILE  = 'archivo.ali'
SET KNOWNS   = '1f4aC'
SET SEQUENCE = 'sec1'
SET STARTING_MODEL= 1
SET ENDING_MODEL  = 1

CALL ROUTINE = 'model'

-----------------------------------------------------------------------------------------------------
BUT

with file modelo2.top the process  not run

INCLUDE

SET OUTPUT_CONTROL = 1 1 1 1 1
SET ALNFILE  = 'archivo.ali'
SET KNOWNS   = '1f4aC'
SET SEQUENCE = 'sec1'
SET STARTING_MODEL= 1
SET ENDING_MODEL  = 1

CALL ROUTINE = 'model'

and log file is:

                         MODELLER 6v2, 17 Feb 2002

     PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS

                                                                
                     Copyright(c) 1989-2002 Andrej Sali         
                            All Rights Reserved                 
                                                                
                            Written by A. Sali                  
          with help from A. Fiser, R. Sanchez, M.A. Marti-Renom,
                   B. Jerkovic, A. Badretdinov, F. Melo,        
                       J.P. Overington & E. Feyfant             
                   Rockefeller University, New York, USA        
                     Harvard University, Cambridge, USA         
                 Imperial Cancer Research Fund, London, UK      
             Birkbeck College, University of London, London, UK 


Kind, OS, HostName, Kernel, Processor: 4, Linux bioinf4 2.4.19-4GB i686
Date and time of compilation         : 07/16/2002 11:42:16
Job starting time (YY/MM/DD HH:MM:SS): 2003/04/23  11:53:47.784

TOP_________>   105  705 SET ALNFILE  = 'archivo.ali'
 
TOP_________>   106  706 SET KNOWNS   = '1f4aC'
 
TOP_________>   107  707 SET SEQUENCE = 'sec1'
 
TOP_________>   108  708 SET STARTING_MODEL = 1
 
TOP_________>   109  709 SET ENDING_MODEL  = 1
 

Dynamically allocated memory at          finish [B,kB,MB]:      2200483    2148.909     2.099
Starting time                                            : 2003/04/23  11:53:47.784
Closing time                                             : 2003/04/23  11:53:50.734
Total CPU time [seconds]                                 :       2.88

----------------------------------------------------------------------------------------
which is a problem?

which is a difference between the files modelo1.top and modelo2.top?

is a bug the modeller?

the files top to contain the same information but with file model2.top the process not run.


thanks..