Re: [modeller_usage] Same values for the models

Atila Iamarino wrote: > Is there a reason for different runs of the same .py file give exactly > the same model, with the same DOPE score and all? Does Modeller make > aways the same pathway?

Of course - it wouldn't be very good science if it were not reproducible! If you want to get different models every time, you will need to set a different random seed. See http://salilab.org/modeller/9v1/manual/node99.html

Ben Webb, Modeller Caretaker