Is there any
rmsd
-energy.
py
script in modeller to
calculate
the
RMSD
and energy of all
generated
pdb
files with template.
Data Plot: Energy vs
Rmsd
?
Thanks
Cheers,
From:
Modeller Caretaker <modeller-care@salilab.org>
To:
Ramin Ekhteiari <ramin_ekh@yahoo.com>
Cc:
"modeller_usage@salilab.org" <modeller_usage@salilab.org>
Sent:
Friday, June 28, 2013 6:15 PM
Subject:
Re: [modeller_usage]
Denovo
loop remodeling
On 6/28/13 7:56 AM, Ramin Ekhteiari wrote:
> Is there any
Denovo
loop remodeling on the base of the fragment data
> base in MODELLER?
Modeller uses a statistical potential for
de
novo
loop modeling, not a
fragment database.
Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org
http://www.salilab.org/modeller/
Modeller mail list:
http://salilab.org/mailman/listinfo/modeller_usage
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