Dear users,
I made a quite unusual model, with three structures as templates, linked by tethers which (presumably) do not present any secondary structures:
>P1;tempA structureX:tempA:1::10::::: aaaaaaaaaa------------------------------
>P1;tempB structureX:tempB:1::10::::: ---------------bbbbbbbbbb---------------
>P1;tempC structureX:tempC:1::10::::: ------------------------------cccccccccc
>P1;model sequence:model:::::::: aaaaaaaaaaTTTTTbbbbbbbbbbTTTTTcccccccccc
Everything's fine, except that in the final model one tether cross directly through the domain C! It is already the case in the file .ini and that seems related to the initial relative positions of the three templates. Is it supposed to occur? Any idea how to fix that?
Regards,
-- Dr Nicolas Le Novère http://www-alt.pasteur.fr/~lenov Dpt of Zoology, Univ of Cambridge, Downing street, Cambridge CB2 3EJ, UK tel: +44 1223 336623 fax: +44 1223 336676 e-mail: nl223@cus.cam.ac.uk