Re: [modeller_usage] prepartion input file for modeller

20 May 2015


      On 5/12/15 7:11 AM, m_deghan1361 wrote:
>   after finding a suitable template by protein blast, should I upload a
> complete fasta of templete to create PIR file or  fasta sequence of
> templete resulting from blast?
You can use as much or as little of the template sequence as you want - 
but Modeller will only use structural information from the template 
where it is aligned to your model sequence.
Ben Webb, Modeller Caretaker
-- 
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