Re: [modeller_usage] malign3d error with different structures but the same sequence

On 8/21/14, 3:36 PM, Felipe Villanelo wrote: > _modeller.ModellerError: fit2xyz_296E> Number of equivalent positions < > 3: 0 > > I search this error, and most of the time is related to too different > proteins that do not align well in sequence.

Close - it means that they do align well *structurally*. Of course, if they don't align well in sequence they're probably not going to align structurally either, but that's not always the case. Are your structures very different (structurally)?

Ben Webb, Modeller Caretaker