dear modeller users,<br>                                  i have created a multi domain model using modeller FAQ first method aligning each template to query sequence and arranging them in PIR format in multi alignment file. but template is not available for a large C terminal region of the model. Even template alignment to query has gap regions between each domains.The model is giving poor stereochemical properties. is there any solution to this problem.<br>
<br><br><br>thanking you <br>saibal das<br><a href="http://m.sc">m.sc</a> bioinformatics<br>BIT mesra<br>India.<br>