On Wed, Oct 27, 2004 at 03:18:56PM +0200, Michel Seigneuret wrote: > I am trying to model a protein with a bound uracil. > I have a template also with bound uracil. > I modified the testyp.lib file in order to name uracil "U" > and I included /U* at the end of the alignment for both > template and target. > The modeling goes on smoothly but I get a strange uracil > with protein backbone atoms: N, CA, C,... Therefore Modeller > thinks U is an aminoacid.
It's hard to diagnose your problem without seeing your input files, and your modified restyp.lib.
Ben Webb, Modeller Caretaker