Re: [modeller_usage] tutorial on mod7v7

Paula R. Kuser Falcão wrote: > I am trying to do the modeller tutorial on a linux machine, > with version mod7v7.

It looks like you've forgotten to call READ_SEQUENCE_DB before calling SEQUENCE_SEARCH. The tutorial reads:

SET SEARCH_RANDOMIZATIONS = 100 SET FILE = 'TvLDH.ali' READ_SEQUENCE_DB SEQUENCE_SEARCH ALIGN_CODES = 'TvLDH', DATA_FILE = ON

Without a sequence database, you have nothing to search against, so it's not surprising that you get no results.

Ben Webb, Modeller Caretaker