Which loop energy?

Hi all, I have recently started to model GPCRs, but as with everyone else I am having trouble with the loops. I have followed the tutorials , kindly given, and have resulted with a number of files with different loops starting and ending in different locations. I have investingated the log files for energy terms, as I understand it the loop model with the lowest energy term is a good starting point. My problem which energy term in the log file do I use, as there seems to be a number of energy terms even for the same loop model number. > Many thanks for any help > John >