Ok, stupid question found it on the manual:

"Define the new residue entry in the residue topology file (RTF), say 'top_heav.lib'. "

Thanks!

João [ .. ] Rodrigues

(Blog) http://doeidoei.wordpress.com (MSN) always_asleep_@hotmail.com (Skype) rodrigues.jglm

On Wed, Nov 4, 2009 at 8:57 PM, João Rodrigues anaryin@gmail.com wrote:

> Thanks for the tip Joel. > > I think I found what I need: herehttp://www.ks.uiuc.edu/Training/Tutorials/science/forcefield-tutorial/forcefield-html/node6.html > > I did a small search in the modlib folder and I couldn't find anything like > this so I assume I'll have to add it myself. Any idea how I load this > topology to my script? > > Regards! > > > João [ .. ] Rodrigues > > (Blog) http://doeidoei.wordpress.com > (MSN) always_asleep_@hotmail.com > (Skype) rodrigues.jglm > > > I’m guessing a patch residue will be what you need. Unfortunately Idon’t >> know how to write them. Check out the manual for a patch. >> >> >> >> J >> >> >> >> _________________________________ >> >> Joel Tyndall, PhD >> >> Senior Lecturer in Medicinal Chemistry >> National School of Pharmacy >> University of Otago >> PO Box 56 Dunedin 9054 >> New Zealand >> http://www.researcherid.com/rid/C-2803-2008 >> >> Pukeka Matua >> Te Kura Taiwhanga Putaiao >> Te Whare Wananga o Otago >> Pouaka Poutapeta 56 Otepoti 9054 >> Aotearoa >> >> Ph / Waea +64 3 4797293 >> Fax / Waeawhakaahua +64 3 4797034 >> >