Hi mzugravu, I guess there are at least some. In my case, when I have the alignment, I often using Jalview to open it and export to PIR format. Bests, Chuong

mzugravu@buffalo.edu wrote: > Hello! > Could you please tell me which program should I use to write an alignment file in the PIR format? > Thank you. > > > _______________________________________________ > modeller_usage mailing list > modeller_usage@salilab.org > https://salilab.org/mailman/listinfo/modeller_usage

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