modelling a chimera from structureM-type templates
I want to model a chimera protein which consists of two individual proteins. The crystallography of these proteins have not been reported, I was only able to find the model for them. How can I build the chimera based on models as templates?
Regards,
Cahya Prihatna
Cahya Prihatna wrote: > I want to model a chimera protein which consists of two individual > proteins. The crystallography of these proteins have not been reported, > I was only able to find the model for them. How can I build the chimera > based on models as templates?
See http://salilab.org/modeller/FAQ.html#1 for building a model of a chimera. As long as you have PDB files for your "known" structures, Modeller doesn't care whether these are real X-ray structures or models.
Ben Webb, Modeller Caretaker
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Modeller Caretaker