Hi there,
I am running Modeller 9v2 on a 64-bit Linux (Suse) box, and when I ran a small test program, it ran fine (as evidenced from the results and log file), but I received the following errors:
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mike@linux-8h71:~/Modelling_projects/Test_Mod9v2> mod9v2 MakePAPFile.py Could not find platform independent libraries <prefix> Could not find platform dependent libraries <exec_prefix> Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>] 'import site' failed; use -v for traceback
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This may have something to do with the directories that various things are in.
mod9v2 lives in
usr/bin/
the actual programs reside in
usr/lib/modeller9v2/
and Python (2.3, 2.4, and 2.5) live in
usr/lib64/
Two questions:
(1) Is this error something to worry about? (2) If so, how do I correct this problem?
As you can guess from the questions, I'm still feeling my way around Linux
Thanks
Mike White
Mike White wrote: > I am running Modeller 9v2 on a 64-bit Linux (Suse) box, and when I ran a > small test program, it ran fine (as evidenced from the results and log > file), but I received the following errors: > > ******************************************************************** > > mike@linux-8h71:~/Modelling_projects/Test_Mod9v2> mod9v2 MakePAPFile.py > Could not find platform independent libraries <prefix> > Could not find platform dependent libraries <exec_prefix> > Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>] > 'import site' failed; use -v for traceback
That's a warning, not an error. See http://salilab.org/modeller/release.html#issues
Ben Webb, Modeller Caretaker
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Mike White -
Modeller Caretaker