Cevdet NACAR wrote: > How can I calculate dope score for multiple templates?

The DOPE score is used to assess the final models, so it doesn't matter if you built them with a single template or multiple templates. You can request DOPE model assessment in automodel by setting assess_methods to assess.DOPE; see http://salilab.org/modeller/manual/node27.html for an example.

Ben Webb, Modeller Caretaker