Hi, Unfortunately, after rpm modeller and after running it as following, I received this message:
[root@195-251-18-90 modeller]# mod9v3 /home/georgios/modeller/scripts_of_modeller/script_1.top Traceback (most recent call last): File "<string>", line 1, in ? File "/usr/lib/modeller9v3/modlib/modeller/top_interpreter/__init__.py", line 36, in run self._runlines(self.lines) File "/usr/lib/modeller9v3/modlib/modeller/top_interpreter/__init__.py", line 150, in _runlines self._set_top_vars(vars) File "/usr/lib/modeller9v3/modlib/modeller/top_interpreter/__init__.py", line 281, in _set_top_vars raise IndexError("No '=' found in variable assignment") IndexError: No '=' found in variable assignment
I have also tried to run modeller from python without success. The message I recieved is the following:
[root@195-251-18-90 modeller]# python Python 2.3.4 (#1, Mar 14 2006, 11:40:38) [GCC 3.4.4 20050721 (Red Hat 3.4.4-2)] on linux2 Type "help", "copyright", "credits" or "license" for more information. >>> mod9v3 /home/maria/modeller/scripts_of_modeller/script_1.top Traceback (most recent call last): File "<stdin>", line 1, in ? NameError: name 'mod9v3' is not defined >>> Does anybody know what is wrong here? With best regards, Maria.
matziast@med.uth.gr wrote: > Unfortunately, after rpm modeller and after running it as following, I received > this message: ... > raise IndexError("No '=' found in variable assignment") > IndexError: No '=' found in variable assignment
It looks like you have a syntax error in your script. You can't set a variable to a value without an '=' in the right place. Either post your script here so we can look at it, or try one of the example scripts first.
> I have also tried to run modeller from python without success. The message I > recieved is the following: > > [root@195-251-18-90 modeller]# python > Python 2.3.4 (#1, Mar 14 2006, 11:40:38) > [GCC 3.4.4 20050721 (Red Hat 3.4.4-2)] on linux2 > Type "help", "copyright", "credits" or "license" for more information. >>>> mod9v3 /home/maria/modeller/scripts_of_modeller/script_1.top > Traceback (most recent call last): > File "<stdin>", line 1, in ? > NameError: name 'mod9v3' is not defined
mod9v3 is the name of the Modeller script, not a Python function - you run it from a regular command line, not from within the Python interpreter.
Ben Webb, Modeller Caretaker
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matziast＠med.uth.gr -
Modeller Caretaker