FW: help

17 Jul 2003


      Message forwarded by list owner
------ Forwarded Message
From: Feng Cui fengcui@iastate.edu
Date: Wed, 16 Jul 2003 18:05:51 -0500 (CDT)
To: modeller-care@salilab.org
Subject: help
Sir,
i downloaded the Modeller 6v2 on my laptop (windows xp). i modified the
mod.bat and modenv.bat based on the Readme file. i tried to run a test case
upon the window command prompt. but the program seems not to be ale to
recognize the MOD6V2 command. the error message is following:
C:\Downloads\modeller6v2\bin>mod.bat ..\examples\tutorial-model\run_tops1
C:\Downloads\modeller6v2\bin>set MODINSTALL6v2=c:\Downloads\modeller6v2
C:\Downloads\modeller6v2\bin>set KEY_MODELLER6v2=XXX
C:\Downloads\modeller6v2\bin>set LIBS_LIB6v2=c:\Downloads\modeller6v2
\modlib\lib
s.lib
C:\Downloads\modeller6v2\bin>set EXECUTABLE_TYPE6v2=i386-windf
C:\Downloads\modeller6v2\bin>set PATH=c:\Downloads\modeller6v2
\bin;C:\Perl\bin;
C:\texmf\miktex\bin;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32
\Wbem;C:\P
rogram Files\Common Files\Adaptec Shared\System;c:\matlab6p5
\bin\win32;C:\KERB;C
:\j2sdk1.4.1_02\bin;c:\Downloads\modeller6v2\bin;c:\Downloads\modeller6v2
\bin;c:
\Downloads\modeller6v2\bin;c:\Downloads\modeller6v2
\bin;c:\Downloads\modeller6v2
\bin;c:\Downloads\modeller6v2\bin
C:\Downloads\modeller6v2\bin>c:\Downloads\modeller6v2
\bin\modeller6v2 ..\example
s\tutorial-model\run_tops1
MODELLER 6v2, 17 Feb 2002
PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS
Copyright(c) 1989-2002 Andrej Sali
                            All Rights Reserved
Written by A. Sali
          with help from A. Fiser, R. Sanchez, M.A. Marti-Renom,
                   B. Jerkovic, A. Badretdinov, F. Melo,
                       J.P. Overington & E. Feyfant
                   Rockefeller University, New York, USA
                     Harvard University, Cambridge, USA
                 Imperial Cancer Research Fund, London, UK
             Birkbeck College, University of London, London, UK
Kind, OS, HostName, Kernel, Processor: 4, Windows_NT WUGRADS x86 Family 15
Model
 2 Stepping 7, Genuine
Date and time of compilation         : Jul 09 2002 16:21:30
Job starting time (YY/MM/DD HH:MM:SS): 2003/07/16  17:53:12.039
rdactio_534E> Command not recognized:  MOD6V2 INITIAL
recover____E> ERROR_STATUS >= STOP_ON_ERROR:        1       1
Dynamically allocated memory at          finish [B,kB,MB]:      2190959
2139.
608     2.089
Starting time                                            : 2003/07/16
17:53:12.
039
Closing time                                             : 2003/07/16
17:53:13.
200
Total CPU time [seconds]                                 :       0.91
C:\Downloads\modeller6v2\bin>
please let me know what i should do. thanks.
Feng Cui
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Modeller Care

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