Dear Sir,
I need your help about a problem I encounter with modeller 7v7 : I have the following error message :
Array too small. Increase MANGPF I can't find where I can modify the value of MANGPF !!!
Maybe it will be helpful for you to know that I have modified parameter and topology files to add the definitions of a Fe4S4 cluster.
Thanks a lot for your help. Best regards, Magali Cottevieille.
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MODELLER 7v7, Sep 12, 2004 09:15pm
PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS
Copyright(c) 1989-2004 Andrej Sali
All Rights Reserved
Written by A. Sali
with help from
B. Webb, M.S. Madhusudhan, M-Y. Shen, M.A. Marti-Renom,
N. Eswar, F. Alber, B. Oliva, A. Fiser,
R. Sanchez, B. Yerkovich, A. Badretdinov,
F. Melo, J.P. Overington, E. Feyfant
University of California, San Francisco, USA
Rockefeller University, New York, USA
Harvard University, Cambridge, USA
Imperial Cancer Research Fund, London, UK
Birkbeck College, University of London, London, UK
Kind, OS, HostName, Kernel, Processor: 4, Linux lagaffe.lmcp.jussieu.fr 2.6.10-1.770_FC2 i686
Date and time of compilation : 09/14/2004 11:06:39
Job starting time (YY/MM/DD HH:MM:SS): 2005/03/25 14:53:53.585
rdparf__223E> Array too small. Increase MANGPF
current maximum, current need: 600 601
recover____E> ERROR_STATUS >= STOP_ON_ERROR: 1 1
Dynamically allocated memory at finish [B,kB,MB]: 77847 76.022 0.074
Starting time : 2005/03/25 14:53:53.585
Closing time : 2005/03/25 14:53:55.735
Total CPU time [seconds] : 1.09
Magali Cottevieille wrote: > I need your help about a problem I encounter with modeller 7v7 : I have > the following error message : > > Array too small. Increase MANGPF > I can't find where I can modify the value of MANGPF !!! > > Maybe it will be helpful for you to know that I have modified parameter > and topology files to add the definitions of a Fe4S4 cluster.
MANGPF is the maximum number of angles in the parameter file, and you can't increase it. One solution is to remove some unused angle parameters from the file - for example, in most cases where you're using the heavy atom only topology, any parameter involving a hydrogen atom can be removed.
Ben Webb, Modeller Caretaker
participants (2)
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Magali Cottevieille
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Modeller Caretaker