I just forgot the executable!

On Tue, Jan 31, 2012 at 3:16 PM, Francesco Pietra chiendarret@gmail.com wrote: > Back to Modeller from a long absence, I am faced by a > trivial, common issue; "no module named modeller" when running > "fill_resid.py", which > reads: > > > from modeller import * > from modeller.automodel import * # Load the automodel class > > long.verbose() > env = environ() > > # directories for input atom files > env.io.atom_files_directory = ['.', '../atom_files'] > > a = loopmodel(env, alnfile = 'alignment.ali', >             knowns = 'my, sequence = 'my_fill') > a.starting_model= 1 > a.ending_model  = 1 > > a.loop.starting_model = 1 > a.loop.ending_model   = 2 > a.loop.md_level       = refine.fast > > a.make() > > > fill_resid.py, my.pdb, and alignement.ali are in the same dworking directory > > > (My aim is to fill lacking residues in ltwo loops of a protein) > The software is correctly installed in debian amd64: > > francesco@gig64:~$ which mod9.10 > /usr/bin/mod9.10 > francesco@gig64:~$ > > > Thanks for advice > francesco pietra > _______________________________________________ > modeller_usage mailing list > modeller_usage@salilab.org > https://salilab.org/mailman/listinfo/modeller_usage