On 6/3/13 9:48 AM, Priya Chaudhary wrote: > I have found that in my template coordinates of 16 atoms are missing, > still in the modeled structure coordinates for those atoms are present. > > How have these coordinates calculated when there are no corresponding > coordinates for these atoms in template ?

Atoms or residues that are not present in the template are constructed using internal coordinates.

Ben Webb, Modeller Caretaker