Darren,

it looks like you executed modeller without giving it a .top file.

Best, ursula

Forwarded by the list owner:

------ Forwarded Message From: owner-modeller_usage@salilab.org Date: Sun, 30 Mar 2003 18:42:39 -0800 To: modeller_usage-approval@salilab.org Subject: BOUNCE modeller_usage@salilab.org: Non-member submission from [Darren Thompson thompson@chemistry.ucsc.edu]

whenever I try and run the executable mod6v2_mac10v2-absoft

i get MODELLER 6v2, 17 Feb 2002

PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS

Copyright(c) 1989-2002 Andrej Sali All Rights Reserved

Written by A. Sali with help from A. Fiser, R. Sanchez, M.A. Marti-Renom, B. Jerkovic, A. Badretdinov, F. Melo, J.P. Overington & E. Feyfant Rockefeller University, New York, USA Harvard University, Cambridge, USA Imperial Cancer Research Fund, London, UK Birkbeck College, University of London, London, UK

Kind, OS, HostName, Kernel, Processor: 4, Darwin Darren-Thompsons-Computer.local. 6.4 Power Mac intosh Date and time of compilation : 10/06/2002 20:50:17 Job starting time (YY/MM/DD HH:MM:SS): 2003/03/30 18:20:11.379

fullfn__230E> File not found: mod Directories: :${MODINSTALL6v2}/bin/ Extensions : .top: Prefixes : nothing, pdb recover____E> ERROR_STATUS >= STOP_ON_ERROR: 1 1

Dynamically allocated memory at finish [B,kB,MB]: 2190959 2139.608 2.089 Starting time : 2003/03/30 18:20:11.379 Closing time : 2003/03/30 18:20:14.284 Total CPU time [seconds] : 2.17 STOP

and %mod6v2 usage: mod script[.top] %

where is this mod script

any help would be appreciated

Darren A. Thompson Researcher UCSC 1156 High St. Santa Cruz, CA 95064 voice: 831-459-3390 fax: 831-459-2935 http://people.ucsc.edu/~ministry

------ End of Forwarded Message