3 Jul
2007
3 Jul
'07
8:57 a.m.
Hi all,
Is there a reason for different runs of the same .py file give exactly the same model, with the same DOPE score and all? Does Modeller make aways the same pathway?
thanks very much,
--
Atila Iamarino
L.E.M.B. - Laboratory of Molecular Evolution and Bioinformatics
Av. Prof. Lineu Prestes, 1734 - USP (University of São Paulo) - ICB
Zip: 05508-000 Phone: +55 11 30917290 / +55 11 30918453
3 Jul
3 Jul
10:22 a.m.
Atila Iamarino wrote: > Is there a reason for different runs of the same .py file give exactly > the same model, with the same DOPE score and all? Does Modeller make > aways the same pathway?
Of course - it wouldn't be very good science if it were not reproducible! If you want to get different models every time, you will need to set a different random seed. See http://salilab.org/modeller/9v1/manual/node99.html
Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage
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Atila Iamarino -
Modeller Caretaker