Hello everybody,
I am trying to use several templates for homology modelleing but some present half-occupancy for some residus of my structures. As soon as I try to modelise my sequence, I get the "structure not read in" message. Is this linked to the occupancy ? I did try the same scripts with a structure which does not present any occupancy uncertainty and it works fine.
Thanks
Dr. Bischler Nicolas NHRF-IOPC 48a, Vasileos Constantinou 11635 Athens Greece Tel : +302107273895 Fax : +302107273831
Nicolas wrote: > I am trying to use several templates for homology modelleing but some > present half-occupancy for some residus of my structures. As soon as I > try to modelise my sequence, I get the "structure not read in" message. > Is this linked to the occupancy ? > I did try the same scripts with a structure which does not present any > occupancy uncertainty and it works fine.
This shouldn't be a problem - Modeller largely ignores the occupancy information anyway. If your problem persists, send me your input files and I'll take a look.
Ben Webb, Modeller Caretaker
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Modeller Caretaker
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Nicolas