Hi,
Can anyone tell me what the following error message means?
Dynamically allocated memory at amaxbnd [B,kB,MB]: 13309089 12997.157 12.693
openf5__224_> Open 11 OLD SEQUENTIAL 09-02-align.ali
openf5__224_> Open 13 OLD SEQUENTIAL ./PNPmono.pdb
defseg__223E> Array too small. Increase MAXSEG
current maximum, current need: 30 31
recover____E> ERROR_STATUS >= STOP_ON_ERROR: 1 1
Thanx,
Nancy
On Thu, Sep 02, 2004 at 06:20:39PM +0800, Nancy Yu wrote: > Can anyone tell me what the following error message means? > > defseg__223E> Array too small. Increase MAXSEG > > current maximum, current need: 30 31
Modeller has a hard-coded maximum number of segments (MAXSEG). The limit in 6v2 is 30. You have two options:
1. Edit your PDB file so that it has 30 or fewer segments (chains). 2. Wait for Modeller 7 to be released (should be within a month) which doesn't exactly 'solve' the problem, but increases the limit to 60.
Ben Webb, Modeller Caretaker
participants (2)
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Modeller Caretaker -
Nancy Yu