Hi,

Change: SET MD_LEVEL = 'refine1' To: SET MD_LEVEL = 'refine_1'

Best, Bozidar

> I wanted to use modeller6v2 with these attached files but I couldn't find > where is the problem. Would you help me please. I tested Modeller with the > file in the diretory examples/ and it worked well. So I couldn't understand...

INCLUDE SET OUTPUT_CONTROL = 1 1 1 1 1 SET MD_LEVEL = 'refine1' SET STARTING_MODEL=1 SET ENDING_MODEL=10 SET DEVIATION = 4.0 SET KNOWNS='1ORD' SET HETATM_IO = off SET WATER_IO = off SET HYDROGEN_IO = off SET ALIGNMENT_FORMAT = 'PIR' SET SEQUENCE='gadmid' SET ALNFILE='AligntPubli1.ali'

CALL ROUTINE='model'

> Thank you very much > > Violaine Moreau >

Bozidar Yerkovich, PhD Rockefeller University New York, NY, 10021, USA 212-327-7206 bozidar@salilab.org http://salilab.org/modeller