Re: [ModPipe-users] MODELLER bug report

Hi Ben,

sorry to bother you, have you had any time to look into our case? The pssm profiles seem ok to me, any other thing we should look at? Should the pdb directory contain uncompressed structures?

Kind regards, Marco

On 05/06/14 19:55, Ben Webb wrote: > On 6/5/14, 6:03 AM, Marco Galardini wrote: >> *alloc_p_215E> Dynamic memory allocation failed.** >> ** Routine, variable, status: ipssm 3** > > This happens if you give Modeller an empty PSSM database (it tries to > allocate 0 bytes of memory to store it). It's already "fixed" in the > upcoming 9.14 release, in that it'll give you a more intelligible > error message, but the underlying cause is that something is wrong > with your PSSM file. > > Ben