Dear ModPipe community,
I'm interested in running a local instance of modpipe, but some of the external dependencies are a bit tricky to be found; in particular:
- JESS - CE (maybe available here? http://cl.sdsc.edu/jfatcatserver/download.jsp) - SEG
They are listed when running ./Setup -h, but not in the online wiki (http://salilab.org/modpipe/doc/install-ext.html#install-ext)
Thanks for your help,
kind regards, Marco
On 5/19/14, 9:42 AM, Marco Galardini wrote: > I'm interested in running a local instance of modpipe, but some of the > external dependencies are a bit tricky to be found; in particular: > > - JESS > - CE (maybe available here? http://cl.sdsc.edu/jfatcatserver/download.jsp) > - SEG
From the online docs: "Other packages are only rarely used by ModPipe, so it is probably not necessary to install them."
We use CE internally in a utility script or two, but I don't think we use JESS or SEG any more. Either way, none of them are used by the main ModPipe pipeline.
Ben
Many thanks Ben,
I should have read the online docs more carefully :)
Marco
On 19/05/14 17:46, Ben Webb wrote: > On 5/19/14, 9:42 AM, Marco Galardini wrote: >> I'm interested in running a local instance of modpipe, but some of the >> external dependencies are a bit tricky to be found; in particular: >> >> - JESS >> - CE (maybe available here? >> http://cl.sdsc.edu/jfatcatserver/download.jsp) >> - SEG > > From the online docs: > "Other packages are only rarely used by ModPipe, so it is probably not > necessary to install them." > > We use CE internally in a utility script or two, but I don't think we > use JESS or SEG any more. Either way, none of them are used by the > main ModPipe pipeline. > > Ben
participants (2)
-
Ben Webb -
Marco Galardini