next up previous contents index
Next: WRITE_MODEL write Up: Handling of atomic coordinates Previous: READ_MODEL read   Contents   Index

READ_MODEL2 -- read coordinates for MODEL2

FILE = $\langle{\tt string:1}\rangle$ 'default' name of the coordinates' file
ATOM_FILES_DIRECTORY = $\langle{\tt string:1}\rangle$ './' input atom files directory list (e.g., 'dir1:dir2:dir3:./:/')
MODEL2_SEGMENT = $\langle{\tt string:2}\rangle$ 'FIRST:@' 'LAST:' segment to be read in
MODEL_FORMAT = $\langle{\tt string:0}\rangle$ 'PDB' selects input atom file format: 'PDB' | 'CHARMM' | 'UHBD'
WATER_IO = $\langle{\tt logical:1}\rangle$ off whether to read water coordinates
HETATM_IO = $\langle{\tt logical:1}\rangle$ off whether to read HETATM coordinates
HYDROGEN_IO = $\langle{\tt logical:1}\rangle$ off whether to read hydrogen coordinates

Description:
This command reads a coordinate file for MODEL2. See the description of the READ_MODEL command for more information. The ability to have a second, independent set of coordinates in memory is used in conjunction with the SUPERPOSE, TRANSFER_RES_NUMB, REORDER_ATOMS and some other commands, as well as for changing the format of the atom file.

Example: See READ_MODEL command.


next up previous contents index
Next: WRITE_MODEL write Up: Handling of atomic coordinates Previous: READ_MODEL read   Contents   Index
Ben Webb 2004-04-20