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sequence_db.write() -- write a database of sequences
chains_list
=
<str:1>
'$(LIB)/CHAINS_3.0_40_XN.cod'
file with sequences
seq_database_file
=
<str:1>
'$(LIB)/CHAINS_all.seq'
file with a list of sequence codes
seq_database_format
=
<str:1>
'PIR'
'PIR' 'FASTA' 'BINARY'; for READ/WRITE_SEQUENCE_DB
Description:
This command will write a database of sequences currently in memory, either in the
PIR
,
FASTA
, or
BINARY
format. The
chains_list
file is written only for the
PIR
or
FASTA
formats.
Example:
See
profile.build()
command.
Ben Webb 2006-02-28