next up previous contents index
Next: automodel.special_restraints() add Up: automodel reference Previous: automodel.make() build   Contents   Index

automodel.cluster() -- cluster all built models

cluster_cut = <float:1>   cluster cutoff distance
This can be called after model building is complete. It clusters all of the output models, and outputs an averaged cluster structure, both optimized (in the file cluster.opt) and unoptimized (in cluster.ini). cluster_cut gives the cluster cutoff distance, as used in model.transfer_xyz().

Ben Webb 2006-02-28