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- Add Python 3 support.
- Add support for Mac OS X 10.7 (Lion).
- Modeller on 64-bit Macs is now built with Intel Fortran, resulting in
a roughly 2x speedup compared to 9.9.
- Add Unicode support; all filenames should be UTF-8 encoded.
- CHARMM angle restraint on GLN OE1 and ASN OD1 atoms strengthened to
avoid generating poor stereochemistry for these residues.
- Bugfix: atoms with undefined coordinates are assigned zero accessibility.
- Bugfix: selection.superpose() no longer fails if given residues containing
multiple selected atoms with the same name.
- Bugfix: don't create empty .DLxxx files when loop modeling with
automodel.trace_output set to 0.
- Bugfix: model.to_iupac() now correctly handles hydrogen atoms in
Arg residues.
- Bugfix: fix a crash in alignment.write() with certain large alignments.
- Bugfix: set model.seq_id correctly when using a user-supplied
initial model with automodel.
- Bugfix: don't force HSE and HSP residues to be ATOM; leave them as HETATM
if they are so labeled in the input PDB.
Next: Comparative modeling class reference
Up: MODELLER updates
Previous: Changes since release 9.10
Contents
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Automatic builds
2012-08-29