loopmodel.loop.write_selection_only — write PDB/mmCIFs containing only the loops

If set to True, then the generated PDB or mmCIF files contain only the loops themselves, not the rest of the protein. The default value is False, which generates complete protein PDBs.

Note that if set to True, automodel.final_malign3d cannot also be set to True, since the final structural alignment requires the full structure of each loop model.