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automodel.nonstd_restraints() -- add restraints on ligands

nonstd_restraints(aln)
This routine adds restraints to keep residues that have no defined topology (generally BLK residues, used to transfer ligands directly from templates, as described in Section 2.2.1) in a reasonable conformation. You can override this method if you need to change these restraints.

By default, three sets of restraints are built:



Ben Webb 2008-02-01