# Example for: Selection.assess_dope()

from modeller import *
from modeller.scripts import complete_pdb

env = Environ()
env.libs.topology.read(file='$(LIB)/top_heav.lib')
env.libs.parameters.read(file='$(LIB)/par.lib')

# Read a model previously generated by Modeller's AutoModel class
mdl = complete_pdb(env, '../atom_files/1fdx.B99990001.pdb')

# Select all atoms in the first chain
atmsel = Selection(mdl.chains[0])

score = atmsel.assess_dope()