modeller>KuntalBhusan
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=== Graphical and web interfaces ===
=== Graphical and web interfaces ===
* [http://www.bioinf.org.uk/software/mint/index.html MINT], a graphical interface to simple Modeller comparative modeling functions
* [http://www.bioinf.org.uk/software/mint/index.html MINT], a graphical interface to simple Modeller comparative modeling functions
* [http://www.uohyd.ernet.in/modellerhui EasyModeller], a windows based GUI to Modeller developed using [[PerlTk]]


=== Usage of Modeller in other systems ===
=== Usage of Modeller in other systems ===
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=== Frameworks and other interfaces ===
=== Frameworks and other interfaces ===
* [http://biskit.pasteur.fr/ Biskit], a modular, object-oriented Python library for structural bioinformatics research.
* [http://biskit.pasteur.fr/ Biskit], a modular, object-oriented Python library for structural bioinformatics research.
* [[EasyModeller]], is a windows executable GUI to MODELLER built using [[PerlTk]].(Link: http://www.uohyd.ernet.in/modellergui/ )
 



Revision as of 21:22, 15 June 2009

Links to other resources and people using Modeller

(!) Please edit this page to link to your own resources or interfaces using Modeller, so that Modeller users can easily find them!

Graphical and web interfaces

  • MINT, a graphical interface to simple Modeller comparative modeling functions
  • EasyModeller, a windows based GUI to Modeller developed using PerlTk

Usage of Modeller in other systems

  • Friend, an integrated multiple structure visualization and multiple sequence alignment application (see "extended capabilities")
  • Structure SNP, which compares structural nsSNP distributions in many proteins or protein complexes, and allows mapping onto protein structures by comparative modeling with Modeller
  • M4T, Multiple Mapping Method with Multiple Templates: Comparative protein structure modeling by combining of multiple templates and optimizing sequence-to-structure alignments
  • MMM, Multiple Mapping Method: a novel approach to the sequence-to-structure alignment problem in comparative protein structure modeling
  • ArchPred, template based loop structure prediction server that delivers a full comparative model with the predicted loop using Modeller
  • Flex-EM, a method for protein structure fitting and refinement guided by cryoEM density.

Frameworks and other interfaces

  • Biskit, a modular, object-oriented Python library for structural bioinformatics research.