[ModPipe-users] Installation Issues

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Subject: [ModPipe-users] Installation Issues

From: Amjad Farooq <>

Date: Thu, 17 Oct 2013 22:50:51 -0400

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Reply-to: Help and discussion for users of ModPipe <>

Dear Ben,

How does one install MODELLER 9.12 inside ModPipe? I have MODELLER 9.12 installed on a linux machine and it runs fine. But, I am having some issues with installing MODELLER 9.12 inside ModPipe.

According to the instructions, one should make changes to the $MODPIPE/ext/mod/bin/modXXX executable: http://salilab.org/modpipe/doc/install-ext.html#install-ext

But, I do not see modXXX under the bin/ directory in MODELLER 9.12? The only scripts available under the bin/ in MODELLER 9.12 appear to be: mod9.12_i386-intel8 modpy.sh.in modslave.py

Is there a way to tell ModPipe to read in automatically pre-installed MODELLER 9.12 at another location instead of installing it again under $MODPIPE/ext/mod/ on the same machine?

Can you please help?!

Thanks very much,

Amjad