IMP-users December 2014

imp-users@salilab.org

2 participants
3 discussions

missing binaries?
by Joel Mackay 16 Dec '14

16 Dec '14

Hi all I have just installed IMP 2.3 and am puzzled by the absence of binaries such as idock and emagefit. I couldn't see any indication in the changelog that they had been discontinued. I also get errors if I type "multifit help" or "cnmultifit help" (recommended commands in the tutorial). The error that comes up is: Traceback (most recent call last): File "/usr/bin/multifit", line 3, in <module> import IMP ImportError: No module named IMP I am wondering if I have done something wrong in the installation. Thanks Joel ------------------------------------------------------------------------------------------------------------------------------ Professor Joel Mackay | NHMRC Senior Research Fellow School of Molecular Bioscience THE UNIVERSITY OF SYDNEY Rm 674, Building G08 | The University of Sydney | NSW | 2006 | Australia T +61 2 9351 3906 | F +61 2 9351 5858 E joel.mackay(a)sydney.edu.au | W www.mmb.usyd.edu.au/mackay/

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installation
by Joel Mackay 15 Dec '14

15 Dec '14

Hi I wanted to install IMP on an HPC system that is running the following: LSB_VERSION="core-2.0-noarch:core-3.2-noarch:core-4.0-noarch:core-2.0-x86_64:core-3.2-x86_64:core-4.0-x86_64" SGI Accelerate 1.4, Build 706r14.sles11sp2-1204092008 SGI Foundation Software 2.6, Build 706r14.sles11sp2-1204092008 SGI MPI 1.4, Build 706r14.sles11sp2-1204092008 SGI UPC 1.4, Build 706r14.sles11sp2-1204092008 SUSE Linux Enterprise Server 11 (x86_64) VERSION = 11 PATCHLEVEL = 2 Will I need to compile or might one of the binaries work? What do you recommend as the best strategy? Thanks Joel ------------------------------------------------------------------------------------------------------------------------------ Professor Joel Mackay | NHMRC Senior Research Fellow School of Molecular Bioscience THE UNIVERSITY OF SYDNEY Rm 674, Building G08 | The University of Sydney | NSW | 2006 | Australia T +61 2 9351 3906 | F +61 2 9351 5858 E joel.mackay(a)sydney.edu.au | W www.mmb.usyd.edu.au/mackay/

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IMP 2.3.1 release
by Ben Webb 01 Dec '14

01 Dec '14

IMP 2.3.1 is now available. This is a bug fix and minor update release. Most notably two complete modeling examples that use the IMP::pmi module are now fully functional: modeling of the Nup84 subcomplex of the nuclear pore complex and of RNA Polymerase II. See https://github.com/salilab/imp/releases/tag/2.3.1 for the full change log. Check it out at http://integrativemodeling.org/ Ben -- ben(a)salilab.org http://salilab.org/~ben/ "It is a capital mistake to theorize before one has data." - Sir Arthur Conan Doyle

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IMP-users December 2014