Hi Rob,
I took your suggestion and it worked! Thank you very much. Apparently
there are some bugs in that commercial software.
Tom
On Fri, 31 Jul 1998, Robert Jorissen wrote:
> Dear fellow MODELLERs
>
> I have found that the problem mentioned by Tom Lee about modelling
> loops only occurs for
> the MSI version of MODELLER and not the academic version. I get around
> the problem by
> putting the following in the TOP file.:
>
> INCLUDE
> DEFINE_STRING VARIABLES = LOOP_CSRFILE LOOP_INI_MODEL
> SET SEQUENCE = 'aaa'
> SET MODEL = 'aaa.pdb' # initial model of the target
> :
> :
>
>
> The define_string... line is the only line to be added.
> I can't remember how I trouble-shot the problem as I fixed it a month
> ago.
>
> I believe this will fix Dr Lee's problem.
>
> Regards
> Rob
>
> --
> -----------------------------------------------------
> Robert Jorissen
>
> Ludwig Institute for Cancer Research
> P.O. BOX 2008, Royal Melbourne Hospital
> Parkville, Victoria 3050, Australia
>
> phone: ++61-3-9341-3155
> fax: ++61-3-9341-1938
>
> e-mail:
> -----------------------------------------------------
>
>
>