Problem with _ and - characters present in filenames
To:
Subject: Problem with _ and - characters present in filenames
From: Owen <>
Date: Tue, 27 May 2003 14:21:43 +0100
I have recently started using modeller 6v4 (previously using modeller
4). When I ran identical files on 6v4 I got the error seen in the log
file below. An example of the type of filename for .top and .ali files
is this:
P42460_3-TPR-317-350.ali
When I removed all the _ and - characters from the filenames, and from
the relevant lines in the top and alignments, the model was built no
problems. Is there a reason why these characters are no longer allowed
in modeller 6v4 and if so, is there a way to make it recognise them to
save alot of time having to rename all my files? Thanks!
MODELLER 6v2, 17 Feb 2002
PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS
Copyright(c) 1989-2002 Andrej Sali
All Rights Reserved
Written by A. Sali
with help from A. Fiser, R. Sanchez, M.A. Marti-Renom,
B. Jerkovic, A. Badretdinov, F. Melo,
J.P. Overington & E. Feyfant
Rockefeller University, New York, USA
Harvard University, Cambridge, USA
Imperial Cancer Research Fund, London, UK
Birkbeck College, University of London, London, UK
Kind, OS, HostName, Kernel, Processor: 4, IRIX64 wolf 6.5 IP27
Date and time of compilation : 07/05/2002 17:12:26
Job starting time (YY/MM/DD HH:MM:SS): 2003/05/27 14:13:21.725
rdactio_534E> Command not recognized:
recover____E> ERROR_STATUS >= STOP_ON_ERROR: 1 1
Dynamically allocated memory at finish [B,kB,MB]:
2190959 2139.608 2.089
Starting time : 2003/05/27
14:13:21.725
Closing time : 2003/05/27
14:13:26.674