Thijs,
One way to do this is by including a "/" to indicate a chain break in your
target sequence and using two templates to align the different parts of the
complex.
Eswar
-----Original Message-----
From: owner-modeller_usage@salilab.org
[">mailto:owner-modeller_usage@salilab.org] On Behalf Of Thijs Beuming
Sent: Thursday, July 10, 2003 4:55 PM
To: modeller_usage@salilab.org
Subject: complex
Dear all,
Can anyone tell me if (and how) it is possible to model a protein
complex in Modeller? How do I tell Modeller that the two proteins are
not connected?
Thanks,
Thijs Beuming