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Modeller input file



Hi,

I am using modeller 6v2.

I have the following file:

P1;1sta
sequence:1sta:1:@:260:@:aldolase:staca:2.00:-1.00
NQEQFDKIKNGKGFIAALDQSGGSTPKALKDYGVEENEYSNDEEMFNLVHDMRTRIITSPAFNGEKILGAILFEQTMDR
EVEGKYTGSYLADKGIVPFLKVDKGLAEEADGVQLMKPIPDLDKLLDRANERGIFGTKMRSNILENNKEAIEKVVKQQF
EVAKEIIAAGLVPIIEPEVNINAKDKEAIEANLAEAIKAELDNLKKDQYVMLKLTIPTKVNAYSELIEHPQVIRVVALS
GGYSRDEANKILKQNDGLIASFSRALVSDLNAQQSDAEFNEKLQEAIDTIFDASVNKA*

I am trying to run modeller for SEARCH, ALIGN2D, MALIGN....commands but everytime I have a reply for wrong command.

a). Do I have to save this file into a particular directory?

b). Do I have to write mod or mod6v2 together with the file to run the program?

Any indication?

Christos

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