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[modeller_usage] as1 matrix

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Subject: [modeller_usage] as1 matrix
From: "Schulze, Diana" <>
Date: Wed, 22 Feb 2006 08:28:51 +0100

Title: as1 matrix

Hi.

To build an alignment in MODELLER the standard is the as1 matrix. Does somebody know why this matrix is used as standard and whats the difference to pam or blosum?

Thanks Dina

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