Subject: [modeller_usage] problem in running modeller8v0
From: aneesh goyal <>
Date: Tue, 28 Mar 2006 07:21:04 -0800 (PST)
hello,
i am trying to run modeller8v0 version on windows
2000. But i am getting these errors which i am unable
to make out.
D:\Data\Aneesh>mod8v0 model_JC1V2.py
'import site' failed; use -v for traceback
Traceback (most recent call last):
File "model_JC1V2.py", line 18, in ?
a.make() # do the
actual homology modelling
File "C:\Program
Files\Modeller8v0/modlib\modeller\automodel\automodel.py",
li
ne 88, in make
self.homcsr(exit_stage)
File "C:\Program
Files\Modeller8v0/modlib\modeller\automodel\automodel.py",
li
ne 299, in homcsr
aln = self.read_alignment()
File "C:\Program
Files\Modeller8v0/modlib\modeller\automodel\automodel.py",
li
ne 293, in read_alignment
aln.append(file=self.alnfile,
align_codes=self.knowns+[self.sequence])
File "C:\Program
Files\Modeller8v0/modlib\modeller\alignment.py", line
36, in
append
return self.__int_append('alignment.append', io,
vars)
File "C:\Program
Files\Modeller8v0/modlib\modeller\alignment.py", line
65, in
__int_append
return self.top.read_alignment(logname,
aln=self.modpt, io=io.modpt,
File "C:\Program
Files\Modeller8v0/modlib\modeller\util\top.py", line
42, in r
ead_alignment
self.error_check()
File "C:\Program
Files\Modeller8v0/modlib\modeller\util\top.py", line
16, in e
rror_check
raise ModellerError
modeller.error.ModellerError
I will be very greatful if somebody can give me some
hints.
regads
aneesh
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