harpreet singh wrote:
I have been working on project work related to homology modeling of a protein. I am using modeller for my studies. I am enjoying working with this very useful software and learning a lot from it. Sir I am not clear of the option min_max_db_length(0, 40000) during building a profile (from build_ profile.py) . Sir kindly help me in clarifying that to what this option actually refers to.Whether it refers to the length of the database or length of sequence.
It is the sequence length; see http://salilab.org/modeller/manual/node209.html
Ben Webb, Modeller Caretaker
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